(1) Frieri M, Kumar K and Boutin A. Antibioticresistance. J. Infect. Public. Heal. (2017) 10: 369-78.
(2) Goldstein E, MacFadden DR and Lipsitch M.Antimicrobial resistance and use, and rates ofhospitalization associated with bacterial infections,including sepsis. arXiv preprint arXiv:1803.07189.(2018)
(3) Cornejo-Juárez P, Vilar-Compte D, Pérez-JiménezC, Namendys-Silva S, Sandoval-Hernández Sand Volkow-Fernández P. The impact of hospitalacquired infections with multidrug-resistant bacteriain an oncology intensive care unit. Int. J. Infect. Dis.(2015) 31: 31-4.
(4) Mave V, Chandanwale A, Kagal A, Khadse S,Kadam D, Bharadwaj R, Dohe V, Robinson ML,Kinikar A and Joshi S. High burden of antimicrobialresistance and mortality among adults and childrenwith community-onset bacterial infections in India.Int. J. Infect. Dis. (2017) 215: 1312-20.
(5) WHO. Fact sheet on HCAI endemic burden worldwide2019 [cited 2019 March 29]; Available from: https://www.who.int/gpsc/country_work/gpsc_ccisc_fact_sheet_en.pdf?ua=1.
(6) Forsblom E, Kakriainen A, Ruotsalainen E andJärvinen A. Comparison of patient characteristics,clinical management, infectious specialistconsultation, and outcome in men and womenwith methicillin-sensitive Staphylococcus aureusbacteremia: a propensity-score adjusted retrospectivestudy. Infection (2018) 46: 837-45.
(7) Salarian AA, Jalali A, Mirakabadi AZ, VatanpourH and Shirazi FH. Cytotoxic effects of two Iranianscorpions Odontobuthusdoriae and Bothutus saulcyion five human cultured cell lines and fractions oftoxic venom. Iran.J. Pharm. Res. (2012) 11: 357.
(8) Aanensen DM, Feil EJ, Holden MT, Dordel J, YeatsCA, Fedosejev A, Goater R, Castillo-Ramírez S,Corander J and Colijn C. Whole-genome sequencingfor routine pathogen surveillance in public health:a population snapshot of invasive Staphylococcusaureus in Europe. MBio. (2016) 7: e00444-16.
(9) Adesoji A, Onuh J, Bagu J and Itohan S. Prevalenceand antibiogram study of Staphylococcus aureusisolated from clinical and selected drinking water of
Dutsin-Ma, Katsina state, Nigeria. Afr. Health Sci.
(2019) 19: 1385-92.
(10) Momtaz H and Hafezi L. Meticillin-resistantStaphylococcus aureus isolated from Iranianhospitals: virulence factors and antibiotic resistanceproperties. Bosn. J. Basic Med. Sci. (2014) 14: 219.
(11) Hoseinnejad M, Jafari SM and Katouzian I.Inorganic and metal nanoparticles and theirantimicrobial activity in food packaging 327Multi-Drug Resistance of Staphylococcus aureus Strainsapplications. Crit. Rev. Microbiol. (2018) 44: 161-81.
(12) Brandt SL, Putnam NE, Cassat JE and Serezani CH.Innate immunity to Staphylococcus aureus: evolvingparadigms in soft tissue and invasive infections. J.Immunol. Res. (2018) 200: 3871-80.
(13) Hofbauer B, Vomacka J, Stahl M, Korotkov VS,Jennings MC, Wuest WM and Sieber SA. Dual inhibitor of Staphylococcus aureus virulence andbiofilm attenuates expression of major toxins andadhesins. Biochemistry (2018) 57: 1814-20.
(14) Zubair M, Fatima F, Begum S and Siddiqui ZH,DNA Barcoding on Bacteria and Its Applicationin Infection Management, in DNA Barcoding andMolecular Phylogeny, Springer (2018) 103-19.
(15) Suriya J, Krishnan M, Bharathiraja S, Sekar Vand Sachithanandam V, Implications and utility ofDNA barcoding, in DNA Barcoding and MolecularPhylogeny, Springer (2018) 45-64.
(16) Lebonah DE, Dileep A, Chandrasekhar K, SreevaniS, Sreedevi B and Pramoda Kumari J. DNABarcoding on Bacteria: A Review. Adv. Biol. (2014)2014: 9.
(17) Srinivasan R, Karaoz U, Volegova M, MacKichanJ, Kato-Maeda M, Miller S, Nadarajan R, BrodieEL and Lynch SV. Use of 16S rRNA Gene forIdentification of a Broad Range of ClinicallyRelevant Bacterial Pathogens. PLOS One (2015) 10:e0117617.
(18) Clement M, Posada D and Crandall KA. TCS: acomputer program to estimate gene genealogies.Mol. Ecol. (2000) 9: 1657-9.
(19) Puillandre N, Lambert A, Brouillet S and AchazG. ABGD, Automatic Barcode Gap Discovery forprimary species delimitation. Mol. Ecol. (2012) 21:1864-77.
(20) Reid NM and Carstens BC. Phylogeneticestimation error can decrease the accuracy of speciesdelimitation: a Bayesian implementation of thegeneral mixed Yule-coalescent model. BMC Evol.Biol. (2012) 12: 196.
(21) Zhang J, Kapli P, Pavlidis P and Stamatakis A. Ageneral species delimitation method with applicationsto phylogenetic placements. J. Bioinform. (2013) 29:2869-76.
(22) Mao D, Wang Z, Wu J, Wu B, Zeng Y, Song K,Yi K and Luo L. China’s wetlands loss to urban
expansion. Land Degrad. Dev. (2018) 29: 2644-57.
(23) Kearse M, Moir R, Wilson A, Stones-HavasS, Cheung M, Sturrock S, Buxton S, CooperA, Markowitz S, Duran C, Thierer T, Ashton B,Meintjes P and Drummond A. Geneious Basic: Anintegrated and extendable desktop software platformfor the organization and analysis of sequence data. J.Bioinform. (2012) 28: 1647-9.
(24) Edgar RC. MUSCLE: multiple sequence alignmentwith high accuracy and high throughput. NucleicAcids Res. (2004) 32: 1792-7.
(25) Kumar S, Stecher G, Li M, Knyaz C and Tamura K.MEGA X: molecular evolutionary genetics analysisacross computing platforms. Mol. biol. evol. (2018)35: 1547-9.
(26) Esmaeili D, Ghorban Alizadegan M, Ranjbar R andMohabati Mobarez A. The prevalence of nosocomialinfections in respiratory tract caused by multidrug resistance bacteria in patients submitted inBaqyiatallah hospital. Ann. Mil. Health Sci. (2007)5: 1185-8.
(27) Ghorban Alizadegan M, Ranjbar R, Joneydi JafariNA, Esfahani AA, Esmaeili D and Goudarzi Z. Astudy on the prevalence of nosocomial infectionsin ICU patients admitted at Baqyiatallah hospital. J.Ilam uni. Med. Sci. (2008) 16.
(28) Ahmadi A, Soltanpour J and Imani FooladiAA. Prevalence of polybacterial infection andantimicrobial susceptibility of wound samples fromdifferent wards. J. Gorgan Univ. Med. Sci. (2016)18: 120-7.
(29) Imani Fooladi A, Parvizi E, Soltanpour M andAhmadi A. Study of prevalence and antimicrobialsusceptibility pattern of poly bacterial pneumonia.Tehran Univ. Med. J. (2015) 73: 632-8.
(30) Nasiri MJ, Goudarzi AM, Aslani HR, GoudarziM, Zamani S and AdinehKharrat S. NosocomialInfections Caused by Drug-Resistant Bacteria in aReferral University Hospital, Tehran, Iran. NBM.(2019) 7: 64-70.
(31) Assunção RG, Pereira WA, Nogueira FJ, Dutra IL,Novais TM and Abreu AG. Antimicrobial Resistanceof Microorganisms Causing Pneumonia in Patientsof a Public Hospital in Brazilian Pre-AmazonRegion. J. Pharm. Pharmacol. (2019) 7: 15-21.
(32) Ejikeugwu C, Okike CE, Edeh C, Nwezeagu F andUgwu M. Characterization of methicillin resistantStaphylococcus aureus (MRSA) isolates usingoxacillin-cefoxitin disk diffusion test (OCDDT). J.Public Health. (2018) 2: 22.
(33) Liu X, Pai P-J, Zhang W, Hu Y, Dong X, QianP-y, Chen D and Lam H. Proteomic response ofmethicillin-resistant S. aureus to a synergisticantibacterial drug combination: a novel erythromycinderivative and oxacillin. Sci. rep. (2016) 6: 19841.
(34) Duplessis C and Crum-Cianflone NF. Ceftaroline:A New Cephalosporin with Activity againstMethicillin-Resistant Staphylococcus aureus
(MRSA). Clinic. Med. Rev. Therap. (2011) 3: a2466.
(35) Nudel K, McClure R, Moreau M, Briars E, AbramsAJ, Tjaden B, Su X-H, Trees D, Rice PA and Massari
328Katoziyan A et al. / IJPR (2020), 19 (3): 321-328P. Transcriptome Analysis of Neisseria gonorrhoeaeduring Natural Infection Reveals DifferentialExpression of Antibiotic Resistance Determinantsbetween Men and Women. mSphere. (2018) 3:e00312-18.
(36) Castleman MJ, Pokhrel S, Triplett KD, KusewittDF, Elmore BO, Joyner JA, Femling JK, Sharma G,Hathaway HJ and Prossnitz ER. Innate Sex Bias ofStaphylococcus aureus Skin Infection Is Driven bya-Hemolysin. J. Immunol. (2017) 2: 657-668.
(37) Purty R and Chatterjee S. DNA Barcoding: Aneffective technique in molecular taxonomy. Austin.J. Biotechnol. Bioeng. (2016) 3: 1059.
(38) Hebert PDN and Gregory TR. The Promise of DNABarcoding for Taxonomy. Sys. Biol. (2005) 54: 852-9.
(39) Saitou N and Nei M. The neighbor-joining method:A new method for reconstructing phylogenetic trees.Mol. Biol. Evol. (1987) 4th: 406-25.
(40) Felsenstein J. Confidence limits on phylogenies:An approach using the bootstrap. Evolution. (1985)39th: 783-91.
(41) Milheiriço C, de Lencastre H and Tomasz A.Full-genome sequencing identifies in the geneticbackground several determinants that modulate the resistance phenotype in methicillin-resistantStaphylococcus aureus strains carrying the novelmecC gene. Antimicrob. Agents Chemother. (2017)61: e02500-16.
(42) Klitgaard RN, Ntokou E, Nørgaard K, Biltoft D,Hansen LH, Trædholm NM, Kongsted J and VesterB. Mutations in the bacterial ribosomal proteinl3 and their association with antibiotic resistance.Antimicrob. Agents Chemother. (2015) 59: 3518-28.
(43) Yang S-J, Mishra NN, Kang K-M, Lee G-Y, Park J-Hand Bayer AS. Impact of multiple single-nucleotidepolymorphisms within mprF on daptomycinresistance in Staphylococcus aureus. Microb. DrugResist. (2018) 24: 1075-81.
(44) Wu EY and Hilliker AK. Identification of rifampicinresistance mutations in Escherichia coli, includingan unusual deletion mutation. J. Mol. Microbiol.Biotechnol. (2017) 27: 356-62.
(45) Kman NE and Bachmann DJ. Biosurveillance: areview and update. Adv. Prev. Med. (2012) 2012: 1-9.